Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=8000

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=8025",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=7975",
    "results": [
        {
            "id": 7988,
            "identifier": "102724844",
            "identifier_type": "int",
            "name": "LOC102724844",
            "properties": {
                "url": "http://identifiers.org/ncbigene/102724844",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "22",
                "description": "immunoglobulin superfamily member 3-like"
            },
            "metanode": "Gene"
        },
        {
            "id": 7989,
            "identifier": "GO:0009386",
            "identifier_type": "str",
            "name": "translational attenuation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0009386",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 7990,
            "identifier": "DB00450",
            "identifier_type": "str",
            "name": "Droperidol",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00450",
                "inchi": "InChI=1S/C22H22FN3O2/c23-17-9-7-16(8-10-17)21(27)6-3-13-25-14-11-18(12-15-25)26-20-5-2-1-4-19(20)24-22(26)28/h1-2,4-5,7-11H,3,6,12-15H2,(H,24,28)",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=RMEDXOLNCUSCGS-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 7991,
            "identifier": "286234",
            "identifier_type": "int",
            "name": "SPATA31E1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/286234",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "9",
                "description": "SPATA31 subfamily E, member 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 7992,
            "identifier": "DB00770",
            "identifier_type": "str",
            "name": "Alprostadil",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00770",
                "inchi": "InChI=1S/C20H34O5/c1-2-3-6-9-15(21)12-13-17-16(18(22)14-19(17)23)10-7-4-5-8-11-20(24)25/h12-13,15-17,19,21,23H,2-11,14H2,1H3,(H,24,25)/b13-12+/t15-,16+,17+,19+/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=GMVPRGQOIOIIMI-DWKJAMRDSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 7993,
            "identifier": "C0034152",
            "identifier_type": "str",
            "name": "Henoch-Schonlein purpura",
            "properties": {
                "url": "http://identifiers.org/umls/C0034152",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 7994,
            "identifier": "100101629",
            "identifier_type": "int",
            "name": "GAGE8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/100101629",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "X",
                "description": "G antigen 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 7995,
            "identifier": "GO:2000738",
            "identifier_type": "str",
            "name": "positive regulation of stem cell differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000738",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 7996,
            "identifier": "GO:0007440",
            "identifier_type": "str",
            "name": "foregut morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0007440",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 7997,
            "identifier": "GO:0051011",
            "identifier_type": "str",
            "name": "microtubule minus-end binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051011",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 7998,
            "identifier": "162282",
            "identifier_type": "int",
            "name": "ANKFN1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/162282",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "17",
                "description": "ankyrin-repeat and fibronectin type III domain containing 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 7999,
            "identifier": "400165",
            "identifier_type": "int",
            "name": "ATP11AUN",
            "properties": {
                "url": "http://identifiers.org/ncbigene/400165",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "13",
                "description": "ATP11A upstream neighbor"
            },
            "metanode": "Gene"
        },
        {
            "id": 8000,
            "identifier": "56971",
            "identifier_type": "int",
            "name": "CEACAM19",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56971",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "carcinoembryonic antigen-related cell adhesion molecule 19"
            },
            "metanode": "Gene"
        },
        {
            "id": 8001,
            "identifier": "C0039235",
            "identifier_type": "str",
            "name": "Junctional tachycardia",
            "properties": {
                "url": "http://identifiers.org/umls/C0039235",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 8002,
            "identifier": "GO:0061624",
            "identifier_type": "str",
            "name": "fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0061624",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 8003,
            "identifier": "GO:0000578",
            "identifier_type": "str",
            "name": "embryonic axis specification",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0000578",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 8004,
            "identifier": "1781",
            "identifier_type": "int",
            "name": "DYNC1I2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1781",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "dynein, cytoplasmic 1, intermediate chain 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 8005,
            "identifier": "55328",
            "identifier_type": "int",
            "name": "RNLS",
            "properties": {
                "url": "http://identifiers.org/ncbigene/55328",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "10",
                "description": "renalase, FAD-dependent amine oxidase"
            },
            "metanode": "Gene"
        },
        {
            "id": 8006,
            "identifier": "64091",
            "identifier_type": "int",
            "name": "POPDC2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/64091",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "popeye domain containing 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 8007,
            "identifier": "DB01224",
            "identifier_type": "str",
            "name": "Quetiapine",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01224",
                "inchi": "InChI=1S/C21H25N3O2S/c25-14-16-26-15-13-23-9-11-24(12-10-23)21-17-5-1-3-7-19(17)27-20-8-4-2-6-18(20)22-21/h1-8,25H,9-16H2",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=URKOMYMAXPYINW-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 8008,
            "identifier": "GO:0052331",
            "identifier_type": "str",
            "name": "hemolysis in other organism involved in symbiotic interaction",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0052331",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 8009,
            "identifier": "8773",
            "identifier_type": "int",
            "name": "SNAP23",
            "properties": {
                "url": "http://identifiers.org/ncbigene/8773",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "synaptosomal-associated protein, 23kDa"
            },
            "metanode": "Gene"
        },
        {
            "id": 8010,
            "identifier": "GO:1902683",
            "identifier_type": "str",
            "name": "regulation of receptor localization to synapse",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1902683",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 8011,
            "identifier": "389400",
            "identifier_type": "int",
            "name": "GFRAL",
            "properties": {
                "url": "http://identifiers.org/ncbigene/389400",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "6",
                "description": "GDNF family receptor alpha like"
            },
            "metanode": "Gene"
        },
        {
            "id": 8012,
            "identifier": "23237",
            "identifier_type": "int",
            "name": "ARC",
            "properties": {
                "url": "http://identifiers.org/ncbigene/23237",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "activity-regulated cytoskeleton-associated protein"
            },
            "metanode": "Gene"
        }
    ]
}