Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=8500

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=8525",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=8475",
    "results": [
        {
            "id": 8489,
            "identifier": "51160",
            "identifier_type": "int",
            "name": "VPS28",
            "properties": {
                "url": "http://identifiers.org/ncbigene/51160",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "vacuolar protein sorting 28 homolog (S. cerevisiae)"
            },
            "metanode": "Gene"
        },
        {
            "id": 8490,
            "identifier": "GO:0000461",
            "identifier_type": "str",
            "name": "endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0000461",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 8491,
            "identifier": "DB08916",
            "identifier_type": "str",
            "name": "Afatinib",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB08916",
                "inchi": "InChI=1S/C24H25ClFN5O3/c1-31(2)8-3-4-23(32)30-21-11-17-20(12-22(21)34-16-7-9-33-13-16)27-14-28-24(17)29-15-5-6-19(26)18(25)10-15/h3-6,10-12,14,16H,7-9,13H2,1-2H3,(H,30,32)(H,27,28,29)/b4-3+/t16-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=ULXXDDBFHOBEHA-CWDCEQMOSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 8492,
            "identifier": "119765",
            "identifier_type": "int",
            "name": "OR4B1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/119765",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "olfactory receptor, family 4, subfamily B, member 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 8493,
            "identifier": "105379072",
            "identifier_type": "int",
            "name": "LOC105379072",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105379072",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "uncharacterized LOC105379072"
            },
            "metanode": "Gene"
        },
        {
            "id": 8494,
            "identifier": "DB01198",
            "identifier_type": "str",
            "name": "Zopiclone",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01198",
                "inchi": "InChI=1S/C17H17ClN6O3/c1-22-6-8-23(9-7-22)17(26)27-16-14-13(19-4-5-20-14)15(25)24(16)12-3-2-11(18)10-21-12/h2-5,10,16H,6-9H2,1H3",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=GBBSUAFBMRNDJC-UHFFFAOYSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 8495,
            "identifier": "C0020964",
            "identifier_type": "str",
            "name": "Immune status",
            "properties": {
                "url": "http://identifiers.org/umls/C0020964",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 8496,
            "identifier": "GO:0051984",
            "identifier_type": "str",
            "name": "positive regulation of chromosome segregation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0051984",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 8497,
            "identifier": "GO:1904693",
            "identifier_type": "str",
            "name": "midbrain morphogenesis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1904693",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 8498,
            "identifier": "205428",
            "identifier_type": "int",
            "name": "C3orf58",
            "properties": {
                "url": "http://identifiers.org/ncbigene/205428",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "3",
                "description": "chromosome 3 open reading frame 58"
            },
            "metanode": "Gene"
        },
        {
            "id": 8499,
            "identifier": "C0699791",
            "identifier_type": "str",
            "name": "Carcinoma stomach",
            "properties": {
                "url": "http://identifiers.org/umls/C0699791",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 8500,
            "identifier": "D019591",
            "identifier_type": "str",
            "name": "Pseudophakia",
            "properties": {
                "url": "http://identifiers.org/mesh/D019591",
                "source": "MeSH",
                "license": "CC0 1.0"
            },
            "metanode": "Symptom"
        },
        {
            "id": 8501,
            "identifier": "C0332798",
            "identifier_type": "str",
            "name": "Open wound",
            "properties": {
                "url": "http://identifiers.org/umls/C0332798",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 8502,
            "identifier": "C2609073",
            "identifier_type": "str",
            "name": "Splenic peliosis",
            "properties": {
                "url": "http://identifiers.org/umls/C2609073",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 8503,
            "identifier": "5932",
            "identifier_type": "int",
            "name": "RBBP8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/5932",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "18",
                "description": "retinoblastoma binding protein 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 8504,
            "identifier": "10599",
            "identifier_type": "int",
            "name": "SLCO1B1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10599",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "solute carrier organic anion transporter family, member 1B1"
            },
            "metanode": "Gene"
        },
        {
            "id": 8505,
            "identifier": "DB00684",
            "identifier_type": "str",
            "name": "Tobramycin",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB00684",
                "inchi": "InChI=1S/C18H37N5O9/c19-3-9-8(25)2-7(22)17(29-9)31-15-5(20)1-6(21)16(14(15)28)32-18-13(27)11(23)12(26)10(4-24)30-18/h5-18,24-28H,1-4,19-23H2/t5-,6+,7+,8-,9+,10+,11-,12+,13+,14-,15+,16-,17+,18+/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=NLVFBUXFDBBNBW-PBSUHMDJSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 8506,
            "identifier": "344558",
            "identifier_type": "int",
            "name": "SH3RF3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/344558",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "2",
                "description": "SH3 domain containing ring finger 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 8507,
            "identifier": "GO:0050671",
            "identifier_type": "str",
            "name": "positive regulation of lymphocyte proliferation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0050671",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 8508,
            "identifier": "GO:0006658",
            "identifier_type": "str",
            "name": "phosphatidylserine metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006658",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 8509,
            "identifier": "GO:0060665",
            "identifier_type": "str",
            "name": "regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0060665",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 8510,
            "identifier": "144124",
            "identifier_type": "int",
            "name": "OR10A5",
            "properties": {
                "url": "http://identifiers.org/ncbigene/144124",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "olfactory receptor, family 10, subfamily A, member 5"
            },
            "metanode": "Gene"
        },
        {
            "id": 8511,
            "identifier": "GO:1902806",
            "identifier_type": "str",
            "name": "regulation of cell cycle G1/S phase transition",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1902806",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 8512,
            "identifier": "GO:0017077",
            "identifier_type": "str",
            "name": "oxidative phosphorylation uncoupler activity",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0017077",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Molecular Function"
        },
        {
            "id": 8513,
            "identifier": "6886",
            "identifier_type": "int",
            "name": "TAL1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/6886",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "T-cell acute lymphocytic leukemia 1"
            },
            "metanode": "Gene"
        }
    ]
}