Node – Django REST framework

Return nodes, sorted by similarity to the search term. Use search=<str> to search identifier for prefix match, and name for substring and trigram searches (similarity defaults to 0.3); Use search=<str>&similarity=<value> to set your own similarity value in the range of (0, 1.0]. Set similarity=1.0 to exclude trigram search. Filter for select metanodes using metanodes=<str>, where <str> is a comma-separated list of metanode abbreviations. For example, metanodes=C,D will restrict to Compound and Disease nodes.

Set other-node=<node_id> to return non-null values for metapath_count. metapath_counts measures the number of metapaths stored in the database between the result node and other node. If search and other-node and both specified, results are sorted by search similarity and results with metapath_count == 0 are returned. If other-node is specified but not search, results are sorted by metapath_count (descending) and only results with metapath_count > 0 are returned.

GET /v1/nodes/?format=api&offset=9475

HTTP 200 OK
Allow: GET
Content-Type: application/json
Vary: Accept

{
    "count": 47031,
    "next": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=9500",
    "previous": "http://search-api.het.io/v1/nodes/?format=api&limit=25&offset=9450",
    "results": [
        {
            "id": 9466,
            "identifier": "10376",
            "identifier_type": "int",
            "name": "TUBA1B",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10376",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "tubulin, alpha 1b"
            },
            "metanode": "Gene"
        },
        {
            "id": 9467,
            "identifier": "GO:2000977",
            "identifier_type": "str",
            "name": "regulation of forebrain neuron differentiation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000977",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 9468,
            "identifier": "GO:2000291",
            "identifier_type": "str",
            "name": "regulation of myoblast proliferation",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2000291",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 9469,
            "identifier": "C0274702",
            "identifier_type": "str",
            "name": "Cholinergic syndrome",
            "properties": {
                "url": "http://identifiers.org/umls/C0274702",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 9470,
            "identifier": "DB01175",
            "identifier_type": "str",
            "name": "Escitalopram",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01175",
                "inchi": "InChI=1S/C20H21FN2O/c1-23(2)11-3-10-20(17-5-7-18(21)8-6-17)19-9-4-15(13-22)12-16(19)14-24-20/h4-9,12H,3,10-11,14H2,1-2H3/t20-/m0/s1",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=WSEQXVZVJXJVFP-FQEVSTJZSA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 9471,
            "identifier": "GO:2001293",
            "identifier_type": "str",
            "name": "malonyl-CoA metabolic process",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_2001293",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 9472,
            "identifier": "4338",
            "identifier_type": "int",
            "name": "MOCS2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/4338",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "5",
                "description": "molybdenum cofactor synthesis 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 9473,
            "identifier": "54360",
            "identifier_type": "int",
            "name": "CYTL1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/54360",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "4",
                "description": "cytokine-like 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 9474,
            "identifier": "GO:1902965",
            "identifier_type": "str",
            "name": "regulation of protein localization to early endosome",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1902965",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 9475,
            "identifier": "84660",
            "identifier_type": "int",
            "name": "CCDC62",
            "properties": {
                "url": "http://identifiers.org/ncbigene/84660",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "coiled-coil domain containing 62"
            },
            "metanode": "Gene"
        },
        {
            "id": 9476,
            "identifier": "10003",
            "identifier_type": "int",
            "name": "NAALAD2",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10003",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "11",
                "description": "N-acetylated alpha-linked acidic dipeptidase 2"
            },
            "metanode": "Gene"
        },
        {
            "id": 9477,
            "identifier": "116496",
            "identifier_type": "int",
            "name": "FAM129A",
            "properties": {
                "url": "http://identifiers.org/ncbigene/116496",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "family with sequence similarity 129, member A"
            },
            "metanode": "Gene"
        },
        {
            "id": 9478,
            "identifier": "PC7_4749",
            "identifier_type": "str",
            "name": "Insulin receptor signalling cascade",
            "properties": {
                "source": "Reactome via Pathway Commons",
                "license": "CC BY 4.0"
            },
            "metanode": "Pathway"
        },
        {
            "id": 9479,
            "identifier": "56829",
            "identifier_type": "int",
            "name": "ZC3HAV1",
            "properties": {
                "url": "http://identifiers.org/ncbigene/56829",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "7",
                "description": "zinc finger CCCH-type, antiviral 1"
            },
            "metanode": "Gene"
        },
        {
            "id": 9480,
            "identifier": "C1112182",
            "identifier_type": "str",
            "name": "Parkinsonian rest tremor",
            "properties": {
                "url": "http://identifiers.org/umls/C1112182",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 9481,
            "identifier": "C0021100",
            "identifier_type": "str",
            "name": "Bullous impetigo",
            "properties": {
                "url": "http://identifiers.org/umls/C0021100",
                "source": "UMLS via SIDER 4.1",
                "license": "CC BY-NC-SA 4.0"
            },
            "metanode": "Side Effect"
        },
        {
            "id": 9482,
            "identifier": "GO:1902415",
            "identifier_type": "str",
            "name": "regulation of mRNA binding",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_1902415",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 9483,
            "identifier": "1511",
            "identifier_type": "int",
            "name": "CTSG",
            "properties": {
                "url": "http://identifiers.org/ncbigene/1511",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "14",
                "description": "cathepsin G"
            },
            "metanode": "Gene"
        },
        {
            "id": 9484,
            "identifier": "10002",
            "identifier_type": "int",
            "name": "NR2E3",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10002",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "15",
                "description": "nuclear receptor subfamily 2, group E, member 3"
            },
            "metanode": "Gene"
        },
        {
            "id": 9485,
            "identifier": "GO:0006909",
            "identifier_type": "str",
            "name": "phagocytosis",
            "properties": {
                "url": "http://purl.obolibrary.org/obo/GO_0006909",
                "source": "Gene Ontology",
                "license": "CC BY 4.0"
            },
            "metanode": "Biological Process"
        },
        {
            "id": 9486,
            "identifier": "3964",
            "identifier_type": "int",
            "name": "LGALS8",
            "properties": {
                "url": "http://identifiers.org/ncbigene/3964",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "1",
                "description": "lectin, galactoside-binding, soluble, 8"
            },
            "metanode": "Gene"
        },
        {
            "id": 9487,
            "identifier": "105377802",
            "identifier_type": "int",
            "name": "LOC105377802",
            "properties": {
                "url": "http://identifiers.org/ncbigene/105377802",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "8",
                "description": "uncharacterized LOC105377802"
            },
            "metanode": "Gene"
        },
        {
            "id": 9488,
            "identifier": "DB01013",
            "identifier_type": "str",
            "name": "Clobetasol propionate",
            "properties": {
                "url": "http://www.drugbank.ca/drugs/DB01013",
                "inchi": "InChI=1/C25H32ClFO5/c1-5-21(31)32-25(20(30)13-26)14(2)10-18-17-7-6-15-11-16(28)8-9-22(15,3)24(17,27)19(29)12-23(18,25)4/h8-9,11,14,17-19,29H,5-7,10,12-13H2,1-4H3/t14-,17-,18-,19-,22-,23-,24-,25-/s2",
                "source": "DrugBank",
                "license": "CC BY-NC 4.0",
                "inchikey": "InChIKey=CBGUOGMQLZIXBE-KBUOYLHWNA-N"
            },
            "metanode": "Compound"
        },
        {
            "id": 9489,
            "identifier": "2193",
            "identifier_type": "int",
            "name": "FARSA",
            "properties": {
                "url": "http://identifiers.org/ncbigene/2193",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "19",
                "description": "phenylalanyl-tRNA synthetase, alpha subunit"
            },
            "metanode": "Gene"
        },
        {
            "id": 9490,
            "identifier": "10956",
            "identifier_type": "int",
            "name": "OS9",
            "properties": {
                "url": "http://identifiers.org/ncbigene/10956",
                "source": "Entrez Gene",
                "license": "CC0 1.0",
                "chromosome": "12",
                "description": "osteosarcoma amplified 9, endoplasmic reticulum lectin"
            },
            "metanode": "Gene"
        }
    ]
}