{"source":{"id":37810,"identifier":"GO:0005578","identifier_type":"str","name":"proteinaceous extracellular matrix","properties":{"url":"http://purl.obolibrary.org/obo/GO_0005578","source":"Gene Ontology","license":"CC BY 4.0"},"metanode":"Cellular Component"},"target":{"id":31534,"identifier":"729238","identifier_type":"int","name":"SFTPA2","properties":{"url":"http://identifiers.org/ncbigene/729238","source":"Entrez Gene","license":"CC0 1.0","chromosome":"10","description":"surfactant protein A2"},"metanode":"Gene"},"path_counts":[{"id":100683367,"adjusted_p_value":1.4186038641507726e-32,"path_count":379,"dwpc":3.110954429638795,"p_value":3.018306093937814e-34,"reversed":false,"metapath_abbreviation":"CCpGuAuG","metapath_name":"Cellular Component–participates–Gene–upregulates–Anatomy–upregulates–Gene","metapath_length":3,"metapath_path_count_density":0.709389,"metapath_path_count_mean":45.8946,"metapath_path_count_max":3938,"metapath_dwpc_raw_mean":6.9259e-05,"metapath_n_similar":47,"metapath_p_threshold":0.0006131262328590808,"metapath_id":"CCpGuAuG","metapath_reversed":false,"metapath_metaedges":[["Cellular Component","Gene","participates","both"],["Gene","Anatomy","upregulates","both"],["Anatomy","Gene","upregulates","both"]],"dgp_id":21323711,"dgp_source_degree":360,"dgp_target_degree":4,"dgp_n_dwpcs":358400,"dgp_n_nonzero_dwpcs":358400,"dgp_nonzero_mean":2.14722878442266,"dgp_nonzero_sd":0.0699178046810436,"dgp_reversed":false,"cypher_query":"MATCH path = (n0:CellularComponent)-[:PARTICIPATES_GpCC]-(n1)-[:UPREGULATES_AuG]-(n2)-[:UPREGULATES_AuG]-(n3:Gene)\nUSING JOIN ON n1\nWHERE n0.identifier = 'GO:0005578' // proteinaceous extracellular matrix\nAND n3.identifier = 729238 // SFTPA2\nAND n1 <> n3\nWITH\n[\nsize((n0)-[:PARTICIPATES_GpCC]-()),\nsize(()-[:PARTICIPATES_GpCC]-(n1)),\nsize((n1)-[:UPREGULATES_AuG]-()),\nsize(()-[:UPREGULATES_AuG]-(n2)),\nsize((n2)-[:UPREGULATES_AuG]-()),\nsize(()-[:UPREGULATES_AuG]-(n3))\n] AS degrees, path\nWITH path, reduce(pdp = 1.0, d in degrees| pdp * d ^ -0.5) AS PDP\nWITH collect({paths: path, PDPs: PDP}) AS data_maps, count(path) AS PC, sum(PDP) AS DWPC\nUNWIND data_maps AS data_map\nWITH data_map.paths AS path, data_map.PDPs AS PDP, PC, DWPC\nRETURN\n  path AS neo4j_path,\n  substring(reduce(s = '', node IN nodes(path)| s + '–' + node.name), 1) AS path,\n  PDP,\n  100 * (PDP / DWPC) AS percent_of_DWPC\nORDER BY percent_of_DWPC DESC\nLIMIT 10"},{"id":57035730,"adjusted_p_value":8.054307981944491e-23,"path_count":512,"dwpc":5.1075046995887154,"p_value":1.713682549349892e-24,"reversed":false,"metapath_abbreviation":"CCpGpCCpG","metapath_name":"Cellular Component–participates–Gene–participates–Cellular Component–participates–Gene","metapath_length":3,"metapath_path_count_density":0.234752,"metapath_path_count_mean":9.99691,"metapath_path_count_max":6389,"metapath_dwpc_raw_mean":6.94473e-05,"metapath_n_similar":47,"metapath_p_threshold":0.0006131262328590808,"metapath_id":"CCpGpCCpG","metapath_reversed":false,"metapath_metaedges":[["Cellular Component","Gene","participates","both"],["Gene","Cellular Component","participates","both"],["Cellular Component","Gene","participates","both"]],"dgp_id":20766661,"dgp_source_degree":360,"dgp_target_degree":12,"dgp_n_dwpcs":49200,"dgp_n_nonzero_dwpcs":49200,"dgp_nonzero_mean":3.0618994775946002,"dgp_nonzero_sd":0.1690683691728607,"dgp_reversed":false,"cypher_query":"MATCH path = (n0:CellularComponent)-[:PARTICIPATES_GpCC]-(n1)-[:PARTICIPATES_GpCC]-(n2)-[:PARTICIPATES_GpCC]-(n3:Gene)\nUSING JOIN ON n1\nWHERE n0.identifier = 'GO:0005578' // proteinaceous extracellular matrix\nAND n3.identifier = 729238 // SFTPA2\nAND n0 <> n2 AND n1 <> n3\nWITH\n[\nsize((n0)-[:PARTICIPATES_GpCC]-()),\nsize(()-[:PARTICIPATES_GpCC]-(n1)),\nsize((n1)-[:PARTICIPATES_GpCC]-()),\nsize(()-[:PARTICIPATES_GpCC]-(n2)),\nsize((n2)-[:PARTICIPATES_GpCC]-()),\nsize(()-[:PARTICIPATES_GpCC]-(n3))\n] AS degrees, path\nWITH path, reduce(pdp = 1.0, d in degrees| pdp * d ^ -0.5) AS PDP\nWITH collect({paths: path, PDPs: PDP}) AS data_maps, count(path) AS PC, sum(PDP) AS DWPC\nUNWIND data_maps AS data_map\nWITH data_map.paths AS path, data_map.PDPs AS PDP, PC, DWPC\nRETURN\n  path AS neo4j_path,\n  substring(reduce(s = '', node IN nodes(path)| s + '–' + node.name), 1) AS path,\n  PDP,\n  100 * (PDP / DWPC) AS percent_of_DWPC\nORDER BY percent_of_DWPC DESC\nLIMIT 10"},{"id":90123483,"adjusted_p_value":3.7044565646591774e-13,"path_count":749,"dwpc":3.0028810216150346,"p_value":7.88182247799825e-15,"reversed":false,"metapath_abbreviation":"CCpGdAdG","metapath_name":"Cellular Component–participates–Gene–downregulates–Anatomy–downregulates–Gene","metapath_length":3,"metapath_path_count_density":0.672871,"metapath_path_count_mean":55.575,"metapath_path_count_max":6492,"metapath_dwpc_raw_mean":6.4276e-05,"metapath_n_similar":47,"metapath_p_threshold":0.0006131262328590808,"metapath_id":"CCpGdAdG","metapath_reversed":false,"metapath_metaedges":[["Cellular Component","Gene","participates","both"],["Gene","Anatomy","downregulates","both"],["Anatomy","Gene","downregulates","both"]],"dgp_id":19868744,"dgp_source_degree":360,"dgp_target_degree":9,"dgp_n_dwpcs":163400,"dgp_n_nonzero_dwpcs":163400,"dgp_nonzero_mean":2.569214043371829,"dgp_nonzero_sd":0.05360992899467774,"dgp_reversed":false,"cypher_query":"MATCH path = (n0:CellularComponent)-[:PARTICIPATES_GpCC]-(n1)-[:DOWNREGULATES_AdG]-(n2)-[:DOWNREGULATES_AdG]-(n3:Gene)\nUSING JOIN ON n1\nWHERE n0.identifier = 'GO:0005578' // proteinaceous extracellular matrix\nAND n3.identifier = 729238 // SFTPA2\nAND n1 <> n3\nWITH\n[\nsize((n0)-[:PARTICIPATES_GpCC]-()),\nsize(()-[:PARTICIPATES_GpCC]-(n1)),\nsize((n1)-[:DOWNREGULATES_AdG]-()),\nsize(()-[:DOWNREGULATES_AdG]-(n2)),\nsize((n2)-[:DOWNREGULATES_AdG]-()),\nsize(()-[:DOWNREGULATES_AdG]-(n3))\n] AS degrees, path\nWITH path, reduce(pdp = 1.0, d in degrees| pdp * d ^ -0.5) AS PDP\nWITH collect({paths: path, PDPs: PDP}) AS data_maps, count(path) AS PC, sum(PDP) AS DWPC\nUNWIND data_maps AS data_map\nWITH data_map.paths AS path, data_map.PDPs AS PDP, PC, DWPC\nRETURN\n  path AS neo4j_path,\n  substring(reduce(s = '', node IN nodes(path)| s + '–' + node.name), 1) AS path,\n  PDP,\n  100 * (PDP / DWPC) AS percent_of_DWPC\nORDER BY percent_of_DWPC DESC\nLIMIT 10"},{"id":94655707,"adjusted_p_value":5.225938074092298e-10,"path_count":1438,"dwpc":1.797082149126052,"p_value":1.1119017178919783e-11,"reversed":false,"metapath_abbreviation":"CCpGeAeG","metapath_name":"Cellular Component–participates–Gene–expresses–Anatomy–expresses–Gene","metapath_length":3,"metapath_path_count_density":0.8615139999999999,"metapath_path_count_mean":745.4119999999999,"metapath_path_count_max":33011,"metapath_dwpc_raw_mean":7.8784e-05,"metapath_n_similar":47,"metapath_p_threshold":0.0006131262328590808,"metapath_id":"CCpGeAeG","metapath_reversed":false,"metapath_metaedges":[["Cellular Component","Gene","participates","both"],["Gene","Anatomy","expresses","both"],["Anatomy","Gene","expresses","both"]],"dgp_id":20123399,"dgp_source_degree":360,"dgp_target_degree":7,"dgp_n_dwpcs":74600,"dgp_n_nonzero_dwpcs":74600,"dgp_nonzero_mean":1.577259276827208,"dgp_nonzero_sd":0.0314736576022927,"dgp_reversed":false,"cypher_query":"MATCH path = (n0:CellularComponent)-[:PARTICIPATES_GpCC]-(n1)-[:EXPRESSES_AeG]-(n2)-[:EXPRESSES_AeG]-(n3:Gene)\nUSING JOIN ON n1\nWHERE n0.identifier = 'GO:0005578' // proteinaceous extracellular matrix\nAND n3.identifier = 729238 // SFTPA2\nAND n1 <> n3\nWITH\n[\nsize((n0)-[:PARTICIPATES_GpCC]-()),\nsize(()-[:PARTICIPATES_GpCC]-(n1)),\nsize((n1)-[:EXPRESSES_AeG]-()),\nsize(()-[:EXPRESSES_AeG]-(n2)),\nsize((n2)-[:EXPRESSES_AeG]-()),\nsize(()-[:EXPRESSES_AeG]-(n3))\n] AS degrees, path\nWITH path, reduce(pdp = 1.0, d in degrees| pdp * d ^ -0.5) AS PDP\nWITH collect({paths: path, PDPs: PDP}) AS data_maps, count(path) AS PC, sum(PDP) AS DWPC\nUNWIND data_maps AS data_map\nWITH data_map.paths AS path, data_map.PDPs AS PDP, PC, DWPC\nRETURN\n  path AS neo4j_path,\n  substring(reduce(s = '', node IN nodes(path)| s + '–' + node.name), 1) AS path,\n  PDP,\n  100 * (PDP / DWPC) AS percent_of_DWPC\nORDER BY percent_of_DWPC DESC\nLIMIT 10"},{"id":41667511,"adjusted_p_value":3.7009824085615604e-08,"path_count":820,"dwpc":2.6928472450190775,"p_value":7.874430656513958e-10,"reversed":false,"metapath_abbreviation":"CCpGeAuG","metapath_name":"Cellular Component–participates–Gene–expresses–Anatomy–upregulates–Gene","metapath_length":3,"metapath_path_count_density":0.755686,"metapath_path_count_mean":149.95600000000002,"metapath_path_count_max":13442,"metapath_dwpc_raw_mean":5.6072e-05,"metapath_n_similar":47,"metapath_p_threshold":0.0006131262328590808,"metapath_id":"CCpGeAuG","metapath_reversed":false,"metapath_metaedges":[["Cellular Component","Gene","participates","both"],["Gene","Anatomy","expresses","both"],["Anatomy","Gene","upregulates","both"]],"dgp_id":20144716,"dgp_source_degree":360,"dgp_target_degree":4,"dgp_n_dwpcs":358400,"dgp_n_nonzero_dwpcs":358400,"dgp_nonzero_mean":2.1786017710366385,"dgp_nonzero_sd":0.07943782175254985,"dgp_reversed":false,"cypher_query":"MATCH path = (n0:CellularComponent)-[:PARTICIPATES_GpCC]-(n1)-[:EXPRESSES_AeG]-(n2)-[:UPREGULATES_AuG]-(n3:Gene)\nUSING JOIN ON n1\nWHERE n0.identifier = 'GO:0005578' // proteinaceous extracellular matrix\nAND n3.identifier = 729238 // SFTPA2\nAND n1 <> n3\nWITH\n[\nsize((n0)-[:PARTICIPATES_GpCC]-()),\nsize(()-[:PARTICIPATES_GpCC]-(n1)),\nsize((n1)-[:EXPRESSES_AeG]-()),\nsize(()-[:EXPRESSES_AeG]-(n2)),\nsize((n2)-[:UPREGULATES_AuG]-()),\nsize(()-[:UPREGULATES_AuG]-(n3))\n] AS degrees, path\nWITH path, reduce(pdp = 1.0, d in degrees| pdp * d ^ -0.5) AS PDP\nWITH collect({paths: path, PDPs: PDP}) AS data_maps, count(path) AS PC, sum(PDP) AS DWPC\nUNWIND data_maps AS data_map\nWITH data_map.paths AS path, data_map.PDPs AS PDP, PC, DWPC\nRETURN\n  path AS neo4j_path,\n  substring(reduce(s = '', node IN nodes(path)| s + '–' + node.name), 1) AS path,\n  PDP,\n  100 * (PDP / DWPC) AS percent_of_DWPC\nORDER BY percent_of_DWPC DESC\nLIMIT 10"},{"id":142106507,"adjusted_p_value":2.3686212920179396e-07,"path_count":663,"dwpc":2.9752765237292302,"p_value":5.039619770250935e-09,"reversed":false,"metapath_abbreviation":"CCpGuAdG","metapath_name":"Cellular Component–participates–Gene–upregulates–Anatomy–downregulates–Gene","metapath_length":3,"metapath_path_count_density":0.6718649999999999,"metapath_path_count_mean":48.0861,"metapath_path_count_max":5370,"metapath_dwpc_raw_mean":6.54443e-05,"metapath_n_similar":47,"metapath_p_threshold":0.0006131262328590808,"metapath_id":"CCpGuAdG","metapath_reversed":false,"metapath_metaedges":[["Cellular Component","Gene","participates","both"],["Gene","Anatomy","upregulates","both"],["Anatomy","Gene","downregulates","both"]],"dgp_id":21283914,"dgp_source_degree":360,"dgp_target_degree":9,"dgp_n_dwpcs":163400,"dgp_n_nonzero_dwpcs":163400,"dgp_nonzero_mean":2.5653391220109225,"dgp_nonzero_sd":0.06816280813081613,"dgp_reversed":false,"cypher_query":"MATCH path = (n0:CellularComponent)-[:PARTICIPATES_GpCC]-(n1)-[:UPREGULATES_AuG]-(n2)-[:DOWNREGULATES_AdG]-(n3:Gene)\nUSING JOIN ON n1\nWHERE n0.identifier = 'GO:0005578' // proteinaceous extracellular matrix\nAND n3.identifier = 729238 // SFTPA2\nAND n1 <> n3\nWITH\n[\nsize((n0)-[:PARTICIPATES_GpCC]-()),\nsize(()-[:PARTICIPATES_GpCC]-(n1)),\nsize((n1)-[:UPREGULATES_AuG]-()),\nsize(()-[:UPREGULATES_AuG]-(n2)),\nsize((n2)-[:DOWNREGULATES_AdG]-()),\nsize(()-[:DOWNREGULATES_AdG]-(n3))\n] AS degrees, path\nWITH path, reduce(pdp = 1.0, d in degrees| pdp * d ^ -0.5) AS PDP\nWITH collect({paths: path, PDPs: PDP}) AS data_maps, count(path) AS PC, sum(PDP) AS DWPC\nUNWIND data_maps AS data_map\nWITH data_map.paths AS path, data_map.PDPs AS PDP, PC, DWPC\nRETURN\n  path AS neo4j_path,\n  substring(reduce(s = '', node IN nodes(path)| s + '–' + node.name), 1) AS path,\n  PDP,\n  100 * (PDP / DWPC) AS percent_of_DWPC\nORDER BY percent_of_DWPC DESC\nLIMIT 10"},{"id":434382,"adjusted_p_value":0.001985909829331578,"path_count":10,"dwpc":4.117742677438215,"p_value":4.2253400624076126e-05,"reversed":false,"metapath_abbreviation":"CCpGiGiG","metapath_name":"Cellular Component–participates–Gene–interacts–Gene–interacts–Gene","metapath_length":3,"metapath_path_count_density":0.522451,"metapath_path_count_mean":23.037,"metapath_path_count_max":33575,"metapath_dwpc_raw_mean":5.9256400000000004e-05,"metapath_n_similar":47,"metapath_p_threshold":0.0006131262328590808,"metapath_id":"CCpGiGiG","metapath_reversed":false,"metapath_metaedges":[["Cellular Component","Gene","participates","both"],["Gene","Gene","interacts","both"],["Gene","Gene","interacts","both"]],"dgp_id":20365092,"dgp_source_degree":360,"dgp_target_degree":2,"dgp_n_dwpcs":320600,"dgp_n_nonzero_dwpcs":315391,"dgp_nonzero_mean":1.5355112383615495,"dgp_nonzero_sd":0.47220496585143573,"dgp_reversed":false,"cypher_query":"MATCH path = (n0:CellularComponent)-[:PARTICIPATES_GpCC]-(n1)-[:INTERACTS_GiG]-(n2)-[:INTERACTS_GiG]-(n3:Gene)\nUSING JOIN ON n1\nWHERE n0.identifier = 'GO:0005578' // proteinaceous extracellular matrix\nAND n3.identifier = 729238 // SFTPA2\nAND n1 <> n2 AND n1 <> n3 AND n2 <> n3\nWITH\n[\nsize((n0)-[:PARTICIPATES_GpCC]-()),\nsize(()-[:PARTICIPATES_GpCC]-(n1)),\nsize((n1)-[:INTERACTS_GiG]-()),\nsize(()-[:INTERACTS_GiG]-(n2)),\nsize((n2)-[:INTERACTS_GiG]-()),\nsize(()-[:INTERACTS_GiG]-(n3))\n] AS degrees, path\nWITH path, reduce(pdp = 1.0, d in degrees| pdp * d ^ -0.5) AS PDP\nWITH collect({paths: path, PDPs: PDP}) AS data_maps, count(path) AS PC, sum(PDP) AS DWPC\nUNWIND data_maps AS data_map\nWITH data_map.paths AS path, data_map.PDPs AS PDP, PC, DWPC\nRETURN\n  path AS neo4j_path,\n  substring(reduce(s = '', node IN nodes(path)| s + '–' + node.name), 1) AS path,\n  PDP,\n  100 * (PDP / DWPC) AS percent_of_DWPC\nORDER BY percent_of_DWPC DESC\nLIMIT 10"},{"id":96409036,"adjusted_p_value":0.004124575677909237,"path_count":602,"dwpc":2.685025561246931,"p_value":8.77569293172178e-05,"reversed":false,"metapath_abbreviation":"CCpGuAeG","metapath_name":"Cellular Component–participates–Gene–upregulates–Anatomy–expresses–Gene","metapath_length":3,"metapath_path_count_density":0.817075,"metapath_path_count_mean":145.012,"metapath_path_count_max":5974,"metapath_dwpc_raw_mean":5.4813500000000006e-05,"metapath_n_similar":47,"metapath_p_threshold":0.0006131262328590808,"metapath_id":"CCpGuAeG","metapath_reversed":false,"metapath_metaedges":[["Cellular Component","Gene","participates","both"],["Gene","Anatomy","upregulates","both"],["Anatomy","Gene","expresses","both"]],"dgp_id":21302394,"dgp_source_degree":360,"dgp_target_degree":7,"dgp_n_dwpcs":74600,"dgp_n_nonzero_dwpcs":74598,"dgp_nonzero_mean":1.7264624626879468,"dgp_nonzero_sd":0.2217711461427231,"dgp_reversed":false,"cypher_query":"MATCH path = (n0:CellularComponent)-[:PARTICIPATES_GpCC]-(n1)-[:UPREGULATES_AuG]-(n2)-[:EXPRESSES_AeG]-(n3:Gene)\nUSING JOIN ON n1\nWHERE n0.identifier = 'GO:0005578' // proteinaceous extracellular matrix\nAND n3.identifier = 729238 // SFTPA2\nAND n1 <> n3\nWITH\n[\nsize((n0)-[:PARTICIPATES_GpCC]-()),\nsize(()-[:PARTICIPATES_GpCC]-(n1)),\nsize((n1)-[:UPREGULATES_AuG]-()),\nsize(()-[:UPREGULATES_AuG]-(n2)),\nsize((n2)-[:EXPRESSES_AeG]-()),\nsize(()-[:EXPRESSES_AeG]-(n3))\n] AS degrees, path\nWITH path, reduce(pdp = 1.0, d in degrees| pdp * d ^ -0.5) AS PDP\nWITH collect({paths: path, PDPs: PDP}) AS data_maps, count(path) AS PC, sum(PDP) AS DWPC\nUNWIND data_maps AS data_map\nWITH data_map.paths AS path, data_map.PDPs AS PDP, PC, DWPC\nRETURN\n  path AS neo4j_path,\n  substring(reduce(s = '', node IN nodes(path)| s + '–' + node.name), 1) AS path,\n  PDP,\n  100 * (PDP / DWPC) AS percent_of_DWPC\nORDER BY percent_of_DWPC DESC\nLIMIT 10"},{"id":3116584,"adjusted_p_value":0.01634097798811311,"path_count":1,"dwpc":5.081895269500008,"p_value":0.004085244497028277,"reversed":false,"metapath_abbreviation":"CCpGiG","metapath_name":"Cellular Component–participates–Gene–interacts–Gene","metapath_length":2,"metapath_path_count_density":0.0379397,"metapath_path_count_mean":0.084468,"metapath_path_count_max":661,"metapath_dwpc_raw_mean":5.4535e-05,"metapath_n_similar":4,"metapath_p_threshold":0.0072042332360942,"metapath_id":"CCpGiG","metapath_reversed":false,"metapath_metaedges":[["Cellular Component","Gene","participates","both"],["Gene","Gene","interacts","both"]],"dgp_id":3225728,"dgp_source_degree":360,"dgp_target_degree":2,"dgp_n_dwpcs":320600,"dgp_n_nonzero_dwpcs":25381,"dgp_nonzero_mean":3.1338746859429,"dgp_nonzero_sd":1.0847299550103584,"dgp_reversed":false,"cypher_query":"MATCH path = (n0:CellularComponent)-[:PARTICIPATES_GpCC]-(n1)-[:INTERACTS_GiG]-(n2:Gene)\nUSING JOIN ON n1\nWHERE n0.identifier = 'GO:0005578' // proteinaceous extracellular matrix\nAND n2.identifier = 729238 // SFTPA2\nAND n1 <> n2\nWITH\n[\nsize((n0)-[:PARTICIPATES_GpCC]-()),\nsize(()-[:PARTICIPATES_GpCC]-(n1)),\nsize((n1)-[:INTERACTS_GiG]-()),\nsize(()-[:INTERACTS_GiG]-(n2))\n] AS degrees, path\nWITH path, reduce(pdp = 1.0, d in degrees| pdp * d ^ -0.5) AS PDP\nWITH collect({paths: path, PDPs: PDP}) AS data_maps, count(path) AS PC, sum(PDP) AS DWPC\nUNWIND data_maps AS data_map\nWITH data_map.paths AS path, data_map.PDPs AS PDP, PC, DWPC\nRETURN\n  path AS neo4j_path,\n  substring(reduce(s = '', node IN nodes(path)| s + '–' + node.name), 1) AS path,\n  PDP,\n  100 * (PDP / DWPC) AS percent_of_DWPC\nORDER BY percent_of_DWPC DESC\nLIMIT 10"},{"id":127611867,"adjusted_p_value":0.020094164487428633,"path_count":3,"dwpc":2.475924807586848,"p_value":0.00042753541462614114,"reversed":false,"metapath_abbreviation":"CCpGpBPpG","metapath_name":"Cellular Component–participates–Gene–participates–Biological Process–participates–Gene","metapath_length":3,"metapath_path_count_density":0.460679,"metapath_path_count_mean":48.3325,"metapath_path_count_max":25228,"metapath_dwpc_raw_mean":7.24431e-05,"metapath_n_similar":47,"metapath_p_threshold":0.0006131262328590808,"metapath_id":"CCpGpBPpG","metapath_reversed":false,"metapath_metaedges":[["Cellular Component","Gene","participates","both"],["Gene","Biological Process","participates","both"],["Biological Process","Gene","participates","both"]],"dgp_id":20738806,"dgp_source_degree":360,"dgp_target_degree":1,"dgp_n_dwpcs":112200,"dgp_n_nonzero_dwpcs":102046,"dgp_nonzero_mean":0.8628494628543263,"dgp_nonzero_sd":0.34566049661424014,"dgp_reversed":false,"cypher_query":"MATCH path = (n0:CellularComponent)-[:PARTICIPATES_GpCC]-(n1)-[:PARTICIPATES_GpBP]-(n2)-[:PARTICIPATES_GpBP]-(n3:Gene)\nUSING JOIN ON n1\nWHERE n0.identifier = 'GO:0005578' // proteinaceous extracellular matrix\nAND n3.identifier = 729238 // SFTPA2\nAND n1 <> n3\nWITH\n[\nsize((n0)-[:PARTICIPATES_GpCC]-()),\nsize(()-[:PARTICIPATES_GpCC]-(n1)),\nsize((n1)-[:PARTICIPATES_GpBP]-()),\nsize(()-[:PARTICIPATES_GpBP]-(n2)),\nsize((n2)-[:PARTICIPATES_GpBP]-()),\nsize(()-[:PARTICIPATES_GpBP]-(n3))\n] AS degrees, path\nWITH path, reduce(pdp = 1.0, d in degrees| pdp * d ^ -0.5) AS PDP\nWITH collect({paths: path, PDPs: PDP}) AS data_maps, count(path) AS PC, sum(PDP) AS DWPC\nUNWIND data_maps AS data_map\nWITH data_map.paths AS path, data_map.PDPs AS PDP, PC, DWPC\nRETURN\n  path AS neo4j_path,\n  substring(reduce(s = '', node IN nodes(path)| s + '–' + node.name), 1) AS path,\n  PDP,\n  100 * (PDP / DWPC) AS percent_of_DWPC\nORDER BY percent_of_DWPC DESC\nLIMIT 10"},{"id":169515698,"adjusted_p_value":0.056890243902439026,"path_count":1,"dwpc":5.91891885124311,"p_value":0.056890243902439026,"reversed":false,"metapath_abbreviation":"CCpG","metapath_name":"Cellular Component–participates–Gene","metapath_length":1,"metapath_path_count_density":0.00252505,"metapath_path_count_mean":0.00252505,"metapath_path_count_max":1,"metapath_dwpc_raw_mean":8.1797e-05,"metapath_n_similar":1,"metapath_p_threshold":1.0,"metapath_id":"CCpG","metapath_reversed":false,"metapath_metaedges":[["Cellular Component","Gene","participates","both"]],"dgp_id":246380,"dgp_source_degree":360,"dgp_target_degree":12,"dgp_n_dwpcs":49200,"dgp_n_nonzero_dwpcs":2799,"dgp_nonzero_mean":5.91891885124311,"dgp_nonzero_sd":0.0,"dgp_reversed":false,"cypher_query":"MATCH path = (n0:CellularComponent)-[:PARTICIPATES_GpCC]-(n1:Gene)\nUSING JOIN ON n0\nWHERE n0.identifier = 'GO:0005578' // proteinaceous extracellular matrix\nAND n1.identifier = 729238 // SFTPA2\nWITH\n[\nsize((n0)-[:PARTICIPATES_GpCC]-()),\nsize(()-[:PARTICIPATES_GpCC]-(n1))\n] AS degrees, path\nWITH path, reduce(pdp = 1.0, d in degrees| pdp * d ^ -0.5) AS PDP\nWITH collect({paths: path, PDPs: PDP}) AS data_maps, count(path) AS PC, sum(PDP) AS DWPC\nUNWIND data_maps AS data_map\nWITH data_map.paths AS path, data_map.PDPs AS PDP, PC, DWPC\nRETURN\n  path AS neo4j_path,\n  substring(reduce(s = '', node IN nodes(path)| s + '–' + node.name), 1) AS path,\n  PDP,\n  100 * (PDP / DWPC) AS percent_of_DWPC\nORDER BY percent_of_DWPC DESC\nLIMIT 10"}],"n_metapaths":11,"pathcount_table_random_id":90123483,"pathcount_table_max_id":169602979}